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- | == Preliminary | + | == Programme == |
+ | ([[public: | ||
**__12 December 2012__** | **__12 December 2012__** | ||
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- **[[public: | - **[[public: | ||
sheep (Ovis aries)]]** - Juha Kantanen (MTT Agrifood Research Finland, Jokioinen, Finland) | sheep (Ovis aries)]]** - Juha Kantanen (MTT Agrifood Research Finland, Jokioinen, Finland) | ||
+ | * 16:20 Coffee Break | ||
+ | * 18:00 Coach | ||
**__13 December 2012__** | **__13 December 2012__** | ||
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|5.) prepare a summary for discussion| | |5.) prepare a summary for discussion| | ||
+ | * 10:30 Coffee Break | ||
* 11:30 - 13:00 Reporting of the different sessions and general discussions | * 11:30 - 13:00 Reporting of the different sessions and general discussions | ||
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* 13:00 - 14:00 Lunch | * 13:00 - 14:00 Lunch | ||
- | * 14:00 - 15:30 Presentations of relevant data analysis tools - speaker to be defined | + | * 14:00 - 15:30 Presentations of relevant data analysis tools |
- | - Oren Tzfadia (Weizmann Institute of Science, Tel Aviv) - The MORPH algorithm: ranking candidate genes for membership in Arabidopsis thaliana and Solanum lycopersicum pathways | + | - Oren Tzfadia (Weizmann Institute of Science, Tel Aviv, Israel) - The MORPH algorithm: ranking candidate genes for membership in Arabidopsis thaliana and Solanum lycopersicum pathways |
- | - Dimitris Vlachakis (Biomedical Research Foundation, Academy of Athens) - Recipes to make the most out of your wetlab data in less than 10 minutes. | + | - Dimitris Vlachakis (Biomedical Research Foundation, Academy of Athens, Greece) - Recipes to make the most out of your wetlab data in less than 10 minutes. |
- | - Jacques van Helden (Université Libre de Bruxelles, Bruxelles) - A quick tour of Regulatory Sequence Analysis Tools (RSAT) and Network Analysis Tools (NeAT) | + | - Jacques van Helden (Université Libre de Bruxelles, Bruxelles, Belgium) - A quick tour of Regulatory Sequence Analysis Tools (RSAT) and Network Analysis Tools (NeAT) |
- | - Tatyana Goldberg (Technische Universität, | + | - Tatyana Goldberg (Technische Universität, |
- | - Domenica D’Elia (institute | + | - Domenica D’Elia (Institute |
- | - Bruno Contreras Moreira (CSCI, Zaragoza) - Introducing get_homologues and footprintDB | + | - Bruno Contreras Moreira (CSCI, Zaragoza, Spain) - Introducing get_homologues and footprintDB |
- | - Petri Klemelä (IT Center for Science, Helsinki) - Chipster: user-friendly analysis software for high-throughput data | + | - Petri Klemelä (IT Center for Science, Helsinki, Finland) - Chipster: user-friendly analysis software for high-throughput data |
+ | - Paul Kersey (European Bioinformatics Institute, Hinxton, GB) - Ensembl beyond humans: genomic resources for animals, plants and microbes | ||
+ | - Mikko Arvas (VTT Technical Research Centre of Finland) - Comparative genome-scale reconstruction of gapless metabolicnetworks for present and ancestral species | ||
+ | - Marco Masseroli (Politecnico di Milano, Milan, Italy) - Genomic and Proteomic Knowledge Base (GPKB) & Bio Search Computing (Bio-SeCo) | ||
* 15:30 - 18:30 Parallell session for test cases specific discussions in light of the results of the topics-wise discussions | * 15:30 - 18:30 Parallell session for test cases specific discussions in light of the results of the topics-wise discussions | ||
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|- propose other collaborators for the follow-up activity| | |- propose other collaborators for the follow-up activity| | ||
|- keep minutes of discussion| | |- keep minutes of discussion| | ||
+ | * 16:20 Coffee Break | ||
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|c) very difficult, scalability problem, tools completely missing, requires new developments (projects over years)| | |c) very difficult, scalability problem, tools completely missing, requires new developments (projects over years)| | ||
+ | * 10:30 Coffee Break | ||
* 11:00 - 13:00 Organization of the follow-up events to approach the solutions of some test cases | * 11:00 - 13:00 Organization of the follow-up events to approach the solutions of some test cases | ||