If you are interested in participating this Coordination Action please contact us!
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| public:loadedtestcases:tc3 [2012/09/12 09:19] – andreas | public:loadedtestcases:tc3 [2019/02/12 09:04] (current) – external edit 127.0.0.1 | ||
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| * AGRIS, TransFac, PLACE for the identification of known cis elements in promoters of interest (e.g. of coexpressed genes).\\ | * AGRIS, TransFac, PLACE for the identification of known cis elements in promoters of interest (e.g. of coexpressed genes).\\ | ||
| * MEME for the identification of motifs overrepresented in a set of promoters. | * MEME for the identification of motifs overrepresented in a set of promoters. | ||
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| \\ | \\ | ||
| Drawbacks: | Drawbacks: | ||
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| - Suggest a GRN in a good schematic presentation that highlights various aspects of the interaction of the TF with its downstream target genes (e.g. cis elements in the promoters to which it might bind; expression induction or repression curve of the target gene); | - Suggest a GRN in a good schematic presentation that highlights various aspects of the interaction of the TF with its downstream target genes (e.g. cis elements in the promoters to which it might bind; expression induction or repression curve of the target gene); | ||
| ==Discussion== | ==Discussion== | ||
| - | nd | + | LF: Possible person to invite: Chris J Needham C.Needham@leeds.ac.uk (see http:// |