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| =====Validation and Training Workshops===== | =====Validation and Training Workshops===== |
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| 10 Validation workshops (see below ‘Workshop topics’) will take place the following 12 month. | 10 Validation workshops (see below ‘Workshop topics’) took place during the last year of the project. |
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| These workshops will consist of a data hack-a-thon session and a training session. During the data hack-a-thon session bioinformaticians and but mainly life scientists will work together to challenge some solutions AllBio worked out together with external scientists. | These workshops consisted of a data hack-a-thon session and a training session. During the data hack-a-thon session bioinformaticians and but mainly life scientists worked together to challenge some solutions AllBio worked out together with external scientists. |
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| ==EMBL-EBI== | ==EMBL-EBI== |
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| Titel: **Agricultural "-omics"** - 7th - 11th July 2014, Hinxton, UK | Titel: **[[http://www.ebi.ac.uk/training/course/Agri-Omics|AllBio Plant and Pathogen Bioinformatics]]** training course - 8 - 11 July 2014 |
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| ==CNR== | ==CNR== |
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| Title: **Non-protein coding RNA and Methylation deep sequencing data in plants** | Title: **[[http://allbioinformatics.eu/bari2014/|Epigenetics, coding and non-coding RNAs- Challenging NGS data]]** - 25 - 26 June 2014 |
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| ==UNIMAN== | ==UNIMAN== |
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| Title: **Ontologies and web services for genome annotation** | Title: **Metagenomics Interoperability and Web Services Workshop** - 10-12 April 2014, Amsterdam, The Netherlands |
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| ==SLU== | ==SLU== |
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| Title: **Bioinformatics approaches to Identify causative sequence variants in farm animals** | Title: **[[http://teacher.bmc.uu.se/ALLBIO2014/|Bioinformatics approaches to Identify causative sequence variants in farm animals]]** Training course, Uppsala Sweden, 12 - 16. May 2014 |
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| ==SIB== | ==SIB== |
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| Title: **NGS methods for identification of mutations and large structural variants** 10th -12th March 2014, Lausanne, Switzerland | Title: **[[http://edu.isb-sib.ch/course/view.php?id=104|NGS methods for identification of mutations and large structural variants]]** 11th -12th March 2014, Lausanne, Switzerland |
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| ==CSC== | ==CSC== |
| Title: **[[public:valid-CSC|RNA-seq data analysis workshop]]** 8th - 10th January 2014, Espoo, Finland | Title: **[[public:valid-CSC|RNA-seq data analysis workshop]]** 8th - 10th January 2014, Espoo, Finland |
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| | Title: **[[http://www.csc.fi/english/csc/courses/archive/chipseq2014|ChIP- and DNase-seq data analysis workshop, 16 - 19 September 2014, CSC, Helsinki, Finland]]** |
| ==UP== | ==UP== |
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| | Title: **[[http://teacher.bmc.uu.se/BIGDATA/Managing_Big_Data.pdf| |
| | Tutorial: Comparative genome annotation methods |
| | ]]** 29-30 April 2014, University of Potsdam, Campus Golm Karl-Liebknecht-Str. 24-25 House 25 Room D 002. Germany |
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| Title: **Comparative genome annotation methods** | Title: **Comparative genome annotation methods** |
| ==RUNMC== | ==RUNMC== |
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| Name: **Bioinformatics of bacteriology** | Title: **[[http://biosb.nl/education/course-portfolio/course-metagenomics-approaches-and-data-analysis/|Bioinformatics of bacteriology]]** Course: Metagenomics Approaches and Data Analysis, March 31, 2014 / April 2, 2014, Nijmegen, The Netherlands. |
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| ==KI== | ==KI== |
| | Title: **[[https://docs.google.com/forms/d/1gfUvWYW12pmnJ-wYKdDNi2coGbrn2vL0UpVQgN9h5WU/ viewform?usp=send_form|AllBio Metagenome data analysis! - 21. - 23. May 2014 - Science for Life Laboratory, Stockholm, Sweden]]** |
| Title: **Environmental metagenome data analysis** | |
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| ==ULB== | ==ULB== |
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| Title: **Comparative genomics approaches to detect cis-regulatory elements in microbial genomes** | Title: **AllBio Workshop: [[public:valid-ULB|Analyzing thousands of bacterial genomes: |
| | gene annotation, metabolism, regulation]]** - 23 - 25 June 2014, Marseille, France |
