If you are interested in participating this Coordination Action please contact us!
This shows you the differences between two versions of the page.
| Both sides previous revisionPrevious revisionNext revision | Previous revisionLast revisionBoth sides next revision | ||
| public:valid-ulb [2014/05/18 13:22] – [Analyzing thousands of bacterial genomes: gene annotation, metabolism, regulation] jvanheld | public:valid-ulb [2014/06/12 13:35] – jvanheld | ||
|---|---|---|---|
| Line 1: | Line 1: | ||
| + | {{ public: | ||
| + | |||
| ==ALLBIO training workshop – Marseille, June 23-25, 2014== | ==ALLBIO training workshop – Marseille, June 23-25, 2014== | ||
| Line 5: | Line 7: | ||
| ==Practical info== | ==Practical info== | ||
| - | * Dates June 23-25, 2014 | + | | Date |June 23-25, 2014 |
| + | | Location | ||
| + | | Organizer | ||
| + | | Participants |~20 | ::: | | ||
| + | | Cost|0€ | ||
| + | | Registration |<color red>We apologize but due to a high request we reached the max number of participants before the deadline | ||
| + | \\ | ||
| + | **THE REGISTRATION IS CLOSED**</ | ||
| - | * Place Marseille, | ||
| - | * Site Aix-Marseille Université (AMU) | ||
| - | |||
| - | * Organizer Jacques van Helden (Jacques.van-Helden@univ-amu.fr) | ||
| - | |||
| - | * Expected participants ~ 20 (no more than 25) | ||
| - | |||
| - | * Registration cost 0€ | ||
| - | |||
| - | * Registration deadline: June 11 | ||
| ==Funding== | ==Funding== | ||
| Line 38: | Line 37: | ||
| The course does not require any computing skills. A basic knowledge of the Linux environment is welcome, but not required. | The course does not require any computing skills. A basic knowledge of the Linux environment is welcome, but not required. | ||
| - | ==Computer environment== | + | ==Contents== |
| - | The training room is equipped with Linux computers, but participants are welcome to bring their own laptop if they wish to work in their familiar environment. | ||
| - | |||
| - | ==Contents== | ||
| This training course will include | This training course will include | ||
| - Short talks illustrating the functionalities offered by bioinformatics resources suited for the analysis of multiple bacterial genomes. | - Short talks illustrating the functionalities offered by bioinformatics resources suited for the analysis of multiple bacterial genomes. | ||
| - Practicals based on concrete study cases: | - Practicals based on concrete study cases: | ||
| - | * multiple genomes from bacteria; | + | |
| - | | + | * comparing |
| - | | + | * extracting |
| - | | + | * metabolic projection: coverage |
| - | | + | * phylogenetic |
| - | | + | * phylogenetic footprints: detection of conserved |
| - Practicals on programmatic use of the tools: | - Practicals on programmatic use of the tools: | ||
| * extracting data for multiple genomes; | * extracting data for multiple genomes; | ||
| * combining data from diverse sources. | * combining data from diverse sources. | ||
| + | |||
| + | ==Computer environment== | ||
| + | |||
| + | If possible, participants are invited to bring their own laptop if they wish to work in their familiar environment. We will rent additional computers for participants who do not dispose of a laptop. | ||
| ==Schedule== | ==Schedule== | ||