If you are interested in participating this Coordination Action please contact us!
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public:valid-ulb [2014/05/18 13:21] – [Analyzing thousands of bacterial genomes: gene annotation, metabolism, regulation] jvanheld | public:valid-ulb [2019/02/12 09:04] (current) – external edit 127.0.0.1 | ||
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==ALLBIO training workshop – Marseille, June 23-25, 2014== | ==ALLBIO training workshop – Marseille, June 23-25, 2014== | ||
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==Practical info== | ==Practical info== | ||
- | * Dates June 23-25, 2014 | + | | Date |June 23-25, 2014 |
+ | | Location | ||
+ | | Organizer | ||
+ | | Participants |~20 | ::: | | ||
+ | | Cost|0€ | ||
+ | | Registration |<color red>We apologize but due to a high request we reached the max number of participants before the deadline | ||
+ | \\ | ||
+ | **THE REGISTRATION IS CLOSED**</ | ||
- | * Place Marseille, | ||
- | * Site Aix-Marseille Université (AMU) | ||
- | |||
- | * Organizer Jacques van Helden (Jacques.van-Helden@univ-amu.fr) | ||
- | |||
- | * Expected participants ~ 20 (no more than 25) | ||
- | |||
- | * Registration cost 0€ | ||
==Funding== | ==Funding== | ||
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The course does not require any computing skills. A basic knowledge of the Linux environment is welcome, but not required. | The course does not require any computing skills. A basic knowledge of the Linux environment is welcome, but not required. | ||
- | ==Computer environment== | + | ==Contents== |
- | The training room is equipped with Linux computers, but participants are welcome to bring their own laptop if they wish to work in their familiar environment. | ||
- | |||
- | ==Contents== | ||
This training course will include | This training course will include | ||
- Short talks illustrating the functionalities offered by bioinformatics resources suited for the analysis of multiple bacterial genomes. | - Short talks illustrating the functionalities offered by bioinformatics resources suited for the analysis of multiple bacterial genomes. | ||
- Practicals based on concrete study cases: | - Practicals based on concrete study cases: | ||
- | * multiple genomes from bacteria; | + | |
- | | + | * comparing |
- | | + | * extracting |
- | | + | * metabolic projection: coverage |
- | | + | * phylogenetic |
- | | + | * phylogenetic footprints: detection of conserved |
- Practicals on programmatic use of the tools: | - Practicals on programmatic use of the tools: | ||
* extracting data for multiple genomes; | * extracting data for multiple genomes; | ||
* combining data from diverse sources. | * combining data from diverse sources. | ||
+ | |||
+ | ==Computer environment== | ||
+ | |||
+ | If possible, participants are invited to bring their own laptop if they wish to work in their familiar environment. We will rent additional computers for participants who do not dispose of a laptop. | ||
==Schedule== | ==Schedule== |