AllBio Ontology Workshop:

“Using web services for improved interoperability in bioinformatics”

October 3-5
Garching, (Munich) Germany

Over 3 days John Ison (EBI), Matus Kalas (UIB) and Steve Pettifer (UniMan) gave 17 participants from biology and bioinformatics an introduction into web services, ontologies for bioinformatics. The event was hosted by Guy Yachtav and Burkhard Rost at the Technische Universitaet Muenchen (TUM).

The teachers in action.





The Workshop will take place at the Institute for Advanced Studies (IAS) across he street form the TUM's Garching Campus

This workshop is planned for biologists and bioinformaticians who are interested in the use of ontologies and web services for their data analysis pipelines.

Deadline for Registration prolonged to 5 September 2012 - SPACE IS LIMITED
THERE IS STILL SPACE - Late registration till 15 September 2012

Please register by sending a short motivation letter to Andreas Gisel (andreas.gisel (at) ba.itb.cnr.it) using as object "AllBio Ontology.

Programme

Day 1

  • 12:00 - 12:45 Assembly
  • 12:45 - 13:00 Welcome note and administrative
  • 13:00 - 14:00 Welcome talk (Burkhard Rost)
  • 14:00 - 14:45 Web services in the life sciences - best practices
  • 14:45 - 15:30 RESTful services over JSON/BioSchema for JSON
  • 15:30 - 15:45 Coffee break
  • 15:45 - 17:00 Web services development for dummies

Day 2

  • 09:00 - 09:15 Assembly
  • 09:15 - 10:30 BioXSD tutorial part 1
  • 10:30 - 10:45 Coffee break
  • 10:45 - 12:00 BioXSD tutorial part 2 (hands on workshop)
  • 12:00 - 13:30 Lunch
  • 13:30 - 14:15 Web services demo
  • 14:15 - 15:30 EDAM tutorial
  • 15:30 - 15:45 Coffee break
  • 15:35 - 17:00 EDAM hands on workshop

Day 3

  • 09:00 - 09:15 Assembly
  • 09:15 - 10:00 Web services demo
  • 10:00 - 11:00 Data visualization on the web using jQuery
  • 11:00 - 12:00 Closing remarks
  • 12:00 - 15:00 Oktoberfest at the hippodrome tent In Munich.

Hotel

There are reserved 23 single rooms at hotel Hoyacker Hof from 03.10. to 05.10.2012. The Hotel is in Garching town's center a few minutes walk from the U-bahn stop (1 subway stop away from the IAS).

Organization Committee

Guy Yachdav
Burkhard Rost
Gert Vriend
Steve Pettifer
Andreas Gisel
Erik Bongcam-Rudloff

public/onto1.txt · Last modified: 2012/10/10 12:02 by andreas
Trace: onto1