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AllBio Ontology Workshop:

“Usage of ontologies for interoperability issues in biology”

October 3-5
Garching, (Munich) Germany

The Workshop will take place at the Institute for Advanced Studies (IAS) across he street form the TUM's Garching Campus

This workshop is planned for biologists and bioinformaticians who are interested to use ontologies and web services for there data analysis pipelines.

<color red> Deadline for Registration 13 August 2012</color>

Programme

Day 1

  • 12:00 - 12:45 assembly
  • 12:45 - 13:00 Welcome note/administrative
  • 13:00 - 14:00 Welcome talk (Burkhard Rost)
  • 14:00 - 14:45 Web services in the life sciences - best practices
  • 14:45 - 15:30 RESTful services over JSON/BioSchema for JSON
  • 15:30 - 15:45 Coffee break
  • 15:45 - 17:00 Survey of web services technologies.

Day 2

  • 09:00 - 09:15 assembly
  • 09:15 - 10:30 BioXSD tutorial part I
  • 10:30 - 10:45 coffee break
  • 10:45 - 12:00 BioXSD tutorial part ii (hands on workshop)
  • 12:00 - 13:30 Lunch
  • 13:30 - 14:15 Web services demo
  • 14:15 - 15:30 EDAM tutorial
  • 15:30 - 15:45 coffee break
  • 15:35 - 17:00 EDAM hands on workshop

Day 3

  • 09:00 - 09:15  assembly
  • 09:15 - 10:00  web services demo
  • 10:00 - 11:00  data visualization on the web using jQuery  
  • 11:00 - 12:00  closing remarks

Hotel

There are reserved 23 single rooms at hotel Hoyacker Hof from 03.10. to 05.10.2012. The Hotel is in Garching town's center few minutes walk from the U-bahn stop (1 subway stop away from the IAS).

Organization Committee

Guy Yadav
Burkhard Rost
Gert Vriend
Steve Pettifer
Erik Bongcam-Rudloff

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