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14:00-14:50 Joint analysis of miRNA and mRNA expression data (Angel Rubio, CEIT, Spain) | 14:00-14:50 Joint analysis of miRNA and mRNA expression data (Angel Rubio, CEIT, Spain) | ||
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+ | BOOKED OUT! 15:00-18:00 **Hands-on tutorial 2: Small RNA data analysis** (Andreas Gisel CNR-ITB) | ||
+ | This tutorial covers a command line based workflow to find known and novel miRNAs using tools like BWA and mirDeep2, so participants should be familiar with Unix. The workflow is developed at ITB, Italy, and it reports the results in a graphical form allowing an easy way to extract the required information. | ||
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Wednesday 8.1.2014 | Wednesday 8.1.2014 | ||
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This hands-on session covers quantification and differential expression analysis of RNA-seq data. The analysis tools used in the exercises include command line applications and Bioconductor packages such as Cuffdiff and DESeq2, so participants need to be familiar with Unix and R. | This hands-on session covers quantification and differential expression analysis of RNA-seq data. The analysis tools used in the exercises include command line applications and Bioconductor packages such as Cuffdiff and DESeq2, so participants need to be familiar with Unix and R. | ||
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Tuesday 7.1.2014 | Tuesday 7.1.2014 | ||